Skip to contents

Write an ORYZA v3 experimental file

write_exp_oryza.Rd

Creates an ORYZA v3 experimental (.exp) file from prepared agronomic, fertilization, phenology and plant observation inputs. This is the low-level writer used after experiment tables have been tidied into one row per experiment.

Usage

write_exp_oryza(
  exp_file,
  LOC_ID,
  CULTIVAR,
  PDAT,
  ESTAB,
  SBDUR,
  NPLDS,
  CROP_SYS,
  TRDAT,
  FERT_obs,
  PHEN_obs,
  PLANT_obs,
  ET_mod = "PRIESTLY TAYLOR"
)

Arguments

exp_file

Character. Full path to the ORYZA .exp file to create.

LOC_ID

Character. Location or experiment identifier.

CULTIVAR

Character. ORYZA cultivar name or code.

PDAT

Date. Planting date.

ESTAB

Character or numeric. Crop establishment method code used by ORYZA.

SBDUR

Numeric. Seedbed duration.

NPLDS

Numeric. Number of plants or seedlings, as expected by the ORYZA template.

CROP_SYS

Character. Crop system descriptor written in the experimental file.

TRDAT

Date or NA. Transplanting date when applicable.

FERT_obs

Data frame with fertilization observations for the experiment, typically including day/date and nitrogen amount columns.

PHEN_obs

Data frame with phenology observations for the experiment.

PLANT_obs

Data frame with plant growth observations for the experiment.

ET_mod

Character. Evapotranspiration method. Supported template labels include "PENMAN", "PRIESTLY TAYLOR", and "MAKKINK".

Value

Character vector with the path of the ORYZA experimental file created.

Details

Use tidy_exp_oryza() to join raw agronomic, phenology, plant, fertilization and yield tables into the row-wise inputs consumed by this writer.

Examples

if (FALSE) { # \dontrun{
# Experimental tidy data
tidy_exp_data <- tidy_exp_oryza(
  agro, phenol, plant, fertil, yield, path = tempdir())

# Write ORYZA experimental files
exp_files_created <- tidy_exp_data %>%
  mutate(file = pmap(., write_exp_oryza)) %>%
  pull(exp_file)

exp_files_created
file.remove(exp_files_created)
} # }